Statistical ecology and large carnivores
Talking about statistical ecology and large carnivores.
Tagging species with deep learning.
Tagging species with deep learning.
Fitting ODE-based model to data in Nimble
Crude attempt at fitting dynamic ODE-BASED models to noisy data with Nimble.
Interactive visualisation of bias in occupancy models
Interactive data visualisation of bias in occupancy models w/ flexdashboard.
Simulations from the Rota's multispecies occupancy model
How to simulate data from the Rota’s multispecies occupancy model.
Bias in occupancy models
Quick & dirty simulations to look at bias in occupancy estimates with respect to species detection for a static/single-season model.
Déprédations par le loup en France
Une analyse descriptive du phénomène de concentration d’attaques de loup sur des élevages d’animaux domestiques en France.
Bayesian implementation of the robust design
Bayesian implementation of Pollock’s robust design capture-recapture models w/ Jags.
R Markdown
In our weekly group meeting this morning, I introduced R Markdown a great #rstats tool to write reproducible documents (reports, articles, slides, websites) smoothly mixing text, code, figures and equations in html, word or pdf format.
SIR models in R
In a recent seminar, S. Gandon (w/ S. Lion and T. Day) used SIR models to illustrate the effect of diff strategies of #SocialDistancing on the #COVID19 epidemic. What better way to learn than to reproduce their results in R?
